Commit 3c13d000 authored by Lucianna Osucha's avatar Lucianna Osucha

Documentation update

parent dda7a660
# map_aic
#
# Module for mapping an arbitrary piece of mRNA to a predetermined list of
# weights. Also contains utilities for editing said predetermined list.
#
# Author: Lucianna Osucha (email:lucianna@vulpinedesigns.com)
# [map_aic]
Module for mapping an arbitrary piece of mRNA to a predetermined list of
weights. Also contains utilities for editing said predetermined list.
##### Author: Lucianna Osucha (email:lucianna@vulpinedesigns.com)
**Contents:**
-*mapAIC.py* Main end user program
-*modMappings.py* Utility interface. Feed files to this modify the preset mappings
-*example_input.txt* An example of input, ready to feed to modMappings.py
- *mapAIC.py* Main end user program
- *modMappings.py* Utility interface. Feed files to this modify the preset mappings
- *example_input.txt* An example of input, ready to feed to modMappings.py
*modMappings.py* comes complete with a helper utility. Use -h or --help to access it.
[map_aic]: https://vulpipedia.vulpinedesigns.co.uk/index.php?n=INITIATORSET.MapNewAICs
"Vulpipedia"
# protein_targeting_and_localization
#
# Module for finding protein localization/targeting strings in strings of Amino Acids
# !!PRE-PRE-ALPHA!! Lots of #TODO. Currently untested
#
# Author: Lucianna Osucha (email:lucianna@vulpinedesigns.com)
# [protein_targeting_and_localization]
Module for finding protein localization/targeting strings in strings of Amino Acids
!!PRE-PRE-ALPHA!! Lots of #TODO. Currently untested
##### Author: Lucianna Osucha (email:lucianna@vulpinedesigns.com)
* * *
**Contents:**
-*protloc.py* Main end user program
-*locStrings.txt* Alphabetized list of known localization strings
- *protloc.py*       Main end user program
- *locStrings.txt*     Alphabetized list of known localization strings
[protein_targeting_and_localization]:
https://vulpipedia.vulpinedesigns.co.uk/index.php?n=INITIATORSET.ProteinTargeting1Localisation
"Vulpipedia"
\ No newline at end of file
# util
#
# Collection of utilities for general use in the INITIATOR_SET module of the
# GUESS
#
# Author: Lucianna Osucha (lucianna@vulpinedesigns.com)
# util
Collection of utilities for general use in the INITIATOR_SET module of the
GUESS
##### Author: Lucianna Osucha (lucianna@vulpinedesigns.com)
***
**Contents:**
-*mRNA.py* Utils for dealing with strands of mRNA
-*AminoChain.py* Utils for dealing with chains of Amino Acids
-*misc-util.py* What it says on the tin.
- *mRNA.py* Utils for dealing with strands of mRNA
- *AminoChain.py* Utils for dealing with chains of Amino Acids
- *misc-util.py* What it says on the tin.
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